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How do I Know if My Laboratory has Outgrown Its LIS System?
June 17, 2026
All one needs to do is spend a single day in a medical laboratory to quickly understand the critical role a laboratory information system (LIS) plays in supporting a lab's technical operations. In simple terms, laboratory information systems record and store patient and specimen data and track specimens through every stage of diagnostic testing. These LIS systems also drive productivity and efficiency while generating and distributing lab reports to clients across various healthcare settings.
Discover More: Learn the Basics and Find Out How the Best Laboratory Information System Software Efficiently Removes Barriers and Maximizes Growth
Whether it's a high-volume, full-service clinical laboratory, a growing pathology group, or a molecular diagnostics start-up, the importance of LIS software cannot be overstated. But what happens when a lab and the broader industry begin to evolve and expand?
In most cases, legacy LIS systems and homegrown pathology lab reporting software solutions lack flexibility and scalability. An inadequate medical LIS system can quickly become a barrier to business success. The best LIS software doesn't have a shelf life. Leading laboratory information system companies that understand this offer flexible, comprehensive LIS systems that support all aspects of laboratory workflow management, adapting and scaling as the lab does, enabling the business to reach its full potential faster.
Discover More: The Best Laboratory Information System Companies and the Advantages They Offer to Their Laboratory Clients
A Note on LIS vs. LIMS
A laboratory information system (LIS) in healthcare and a laboratory information management system (LIMS) are two distinct diagnostic lab software solutions; people often use these terms interchangeably, even though developers build them to support radically different types of labs.
Discover More: The Differences Between Laboratory Information Management Systems (Lab LIMS) and Laboratory Information Systems (LIS Software)
Tips for Evaluating Laboratory Information Systems
Identifying if a lab has outgrown its laboratory information system software from within can be challenging, but it's vitally important for efficient operations and scalability. As an LIS company with over 20 years of industry experience, and having replaced legacy LIS systems in hundreds of laboratory facilities, we at LigoLab are acutely aware of the struggles labs with inadequate LIS lab solutions face. That’s why we’ve compiled a list of common issues that typically indicate when it’s time for a lab to upgrade its lab workflow support with advanced LIS pathology software.
Discover More: Comparing LigoLab Informatics Platform with Legacy Laboratory Information System Software

Is Your Lab Experiencing Any of These LIS System Issues?
LIS System Difficulty Adapting to Changes
If your LIS medical solution struggles to keep pace with laboratory workflow management changes, it's a sign that you've outgrown the pathology software. Your lab information system should be flexible enough to adapt to new tests, regulatory changes, and updated, more streamlined workflows, and it should allow your personnel to make changes via configuration settings to enhance lab workflow efficiency.
Many laboratory information system vendors charge thousands of dollars for even minor configuration changes, which often take weeks or months to deliver, and some requests are never fully completed. If your lab frequently encounters roadblocks or delays when requesting system configuration updates, it may be time to consider a more agile, adaptable LIS that empowers your team to make changes quickly and efficiently.
Bottlenecks in Laboratory Workflow Management
Operational efficiency is paramount in any laboratory setting. If your laboratory information system causes delays due to slow processing times, data entry errors, or convoluted workflows that require excessive labor because of insufficient diagnostic lab software support, it could be a sign that your LIS is holding you back.
A modern medical laboratory information system streamlines operations through advanced rules and automation, empowering laboratory technologists to work smarter, not harder, by eliminating reliance on external lab tools and manual processes such as spreadsheets and log sheets.
Costly Manual LIS System Workarounds
Examples of laboratory information systems with advanced functionality include rule- and automation-based capabilities that help ease pressure on a lab's staffing requirements, a critical consideration at a time when most labs are struggling with the cost of acquiring and retaining qualified personnel.
Are manual workarounds consuming too much of your lab's FTE budget? If so, it's a good time to consult other lab vendors and learn how modern organizations leverage LIS system automation to keep expenses and compliance in check.
Discover More: What Caused the Current Shortage of Medical Laboratory Technologists and What Steps Need to Be Taken to Solve the Problem
Inadequate LIS System Integration
An effective LIS platform should seamlessly integrate with other key laboratory software systems, including electronic health records (EHRs), laboratory billing software, government agencies, and lab instrumentation.
When a medical LIS fails to communicate effectively with other pathology lab software solutions, it creates unnecessary manual work, lost revenue opportunities, an increased risk of errors, and wasted tech time.
Limited LIS System Reporting Capabilities
As your clinical laboratory or pathology group expands, the demand for detailed, comprehensive statistical and productivity reporting grows alongside it. If your current LIS system struggles to deliver the insights you need, makes data access and analysis cumbersome, or requires days rather than minutes to generate monthly, quarterly, or annual reports, it's a clear sign you've outgrown it.
A modern, sophisticated laboratory information system provides customizable reporting and advanced analytics that empower data-driven decision-making and continuous performance improvement. Custom, personalized report templates that align with client design and delivery preferences are no longer optional; clients now expect them. Without the ability to easily modify and adapt reports to meet customer needs, your business risks falling behind.
If your LIS software vendor charges $5,000–$10,000 every time you need a report configuration change, that model is unsustainable for growth. In contrast, modern LIS software enables your team to update and customize reports quickly and efficiently at no additional cost.
Discover More: Streamline Your Lab Workflow with LigoLab’s LIS Software: Customized Lab Reports & Unparalleled Client Support
Inadequate Lab Information System Support for Future Growth
If your laboratory information system can't scale alongside your growth plans, it's a clear indication you've outgrown it.

Whether you're expanding your test menu, increasing testing volumes, or opening new locations, a modern LIS system with advanced functionality should enable that growth, not limit it.
Developers built legacy and antiquated pathology LIS systems for their time, but today's dynamic laboratory environment demands far more. Modern LIS laboratory information system software delivers the scalability, flexibility, and performance needed to thrive. Labs that remain tied to outdated LIS software often face artificial growth ceilings, operational bottlenecks, and missed opportunities, roadblocks that simply don't exist with today's advanced, future-ready LIS system platforms.
Laboratory Information System Compliance Gaps
Regulatory compliance is a critical aspect of laboratory operations. If your medical laboratory information system struggles to meet the latest regulatory requirements for organizations such as CAP (College of American Pathologists) and CLIA (Clinical Laboratory Improvement Amendments), it's time to consider an upgrade.
The best laboratory information systems meet current standards and can quickly pivot to handle and standardize new clinical lab workflows as new regulations emerge. LigoLab's LIS system platform, for example, not only automates and standardizes procedures but also offers compliance-conscious clinical laboratory management, ad hoc data query capabilities, and compliance verification at every stage, ensuring that its LIS lab partners have the tools to operate within regulatory guidelines at all times.
Discover More: A Detailed Look at How Modern Laboratory Information Systems Fully Support Quality Control
Tips to Maintain Compliance and Prepare for Audits
Whether using LigoLab's all-in-one LIS system platform or another pathology lab management system, to maintain compliance with regulatory standards and prepare for audits, here are a few helpful tips for medical laboratories to follow:

- Follow Regional Guidelines: Each region in the United States has specific regulatory bodies and standards that govern laboratory operations, including test performance, personnel qualifications, quality assurance, quality control, and proficiency testing.
- Documentation: Staff must thoroughly document all procedures and protocols with a robust, searchable audit trail that captures every activity, from specimen collection and processing to reporting. Documentation should remain current and easily accessible for audits and inspections.
- Training: Laboratory staff must receive appropriate training and undergo regular competency assessments covering both technical procedures and regulatory requirements. Modern laboratory information systems support this through built-in training environments managed by the LIS provider.
- Quality Control and Assurance: Routine quality control (QC) checks should be performed on all equipment, reagents, and procedures, while quality assurance (QA) programs ensure the overall integrity of the lab's work. Advanced LIS software allows labs to track QC and QA data directly within the system, eliminating manual tracking via spreadsheets or log sheets.
- Validation and Calibration: Staff must validate new equipment and tests before using them on patient samples, and regularly calibrate all instruments per the manufacturer's guidelines. Modern LIS software assists by automatically maintaining validation records and managing calibration and maintenance schedules.
- Safety: Laboratories must follow strict safety protocols to protect patients, staff, and the environment, including proper handling and disposal of biohazardous materials, appropriate use of personal protective equipment, and regular safety training. A modern LIS system with embedded sample tracking modules enhances both safety and compliance.
- Privacy and Confidentiality: Staff must manage patient data in compliance with privacy laws, including HIPAA, by implementing secure data storage and transmission, strict access controls, encryption, and audit trails. Advanced LIS systems safeguard data while enabling patients to access their results securely.
- Regular Audits and Inspections: Conduct routine internal audits to ensure compliance and readiness for unannounced regulatory inspections.
- Continual Improvement: Commit to continuous improvement by routinely reviewing and updating procedures, addressing non-compliance issues, and staying current with new standards and best practices. Leading LIS software supports this through powerful analytics and reporting tools.
A few additional considerations: some laboratory information systems include rule engines that check for potential compliance issues before processing orders or reporting results. The best LIS software can also interface with electronic health records, laboratory billing solutions, and regional or national health information exchanges, helping to ensure data is shared securely while meeting interoperability requirements. Keep in mind that compliance requirements vary by region and laboratory type, so it's essential to understand the specific regulations applicable to your area and field.
An advanced laboratory information system plays a vital role in supporting regulatory compliance by safeguarding data integrity, upholding rigorous quality control standards, enabling comprehensive reporting, and delivering powerful analytics. However, the ultimate responsibility for maintaining compliance always rests with the laboratory's personnel.
No Cloud and Mobile Support for the LIS System
A modern laboratory information system should offer both on-premises and cloud deployment options. If your current LIS system lacks this flexibility, it can restrict your ability to access critical data remotely, scale efficiently, achieve strategic objectives, and take advantage of automatic software updates and secure off-site data backups.
High Total Cost of LIS System Ownership
If your laboratory information system requires frequent, expensive updates, and your LIS lab vendor continually charges for modules, users, upgrades, or new features, that's a clear red flag. Other warning signs include excessive customization fees, long implementation timelines, high maintenance costs, and dependence on an in-house IT team just to keep the LIS system running.
Modern pathology lab management should deliver exceptional value without an inflated total cost of ownership. A flexible, future-ready solution can transform your operations by streamlining workflows, enhancing reporting, and empowering sustainable laboratory growth.
Industry Insights: The Rise and Fall of CoPath LIS - A Legacy Casualty of the Modern Lab Information System Era
How Will I Know if the New Laboratory Information System is an Upgrade?
Just as every medical laboratory operates differently, no two laboratory information systems, or the laboratory information system companies that develop them, are the same. Here are the key ways to determine whether the LIS system you're evaluating truly represents an upgrade over your current pathology lab management solution.

Examples of Laboratory Information Systems with Comprehensive Features and Functionality
Selecting the best laboratory information system at this stage is crucial. The last thing any lab wants is to invest in a system that limits functionality or future growth. Fortunately, advanced LIS software platforms with fully integrated modules designed to support long-term success are both available and affordable. As you evaluate potential solutions, confirm whether the laboratory information system you're considering includes these essential components:
- Rule Engine
- Automation Engine
- Integration Engine
- Specimen Tracking
- Lab Billing Management
- Patient Engagement
- Outreach (Ordering, Reporting, Supply Ordering, Tracking)
- Document Scanning
- Send Out Management
- Business Intelligence
- Customer Service Management
With LigoLab, every module and application operates in harmony, delivering a unified laboratory information system software solution designed to meet the complex, evolving needs of modern clinical laboratories, reference labs, and pathology groups.
LIS System Services and Support
After confirming that the laboratory information system under evaluation offers comprehensive functionality, the next step is to assess the LIS vendor's approach to customer service and support. It is critical, as LIS software support can sometimes involve hidden or unexpected costs for adding users or modules as your lab grows- the last thing you want after committing to a new pathology lab management system.
For truly optimized laboratory workflow management, your LIS software partner should act as an extension of your team, offering 24/7 assistance for urgent issues and providing unlimited support and training during standard business hours.
Discover More: Market Differentiation and Unmatched Customer Service - Two Major Reasons Why You Should Consider LigoLab for Your LIS System Upgrade

LigoLab’s Commitment to Independent Laboratories
Independent clinical laboratories, reference labs, and pathology groups often receive inadequate support within the broader healthcare ecosystem. That's why choosing a laboratory information system backed by an LIS software vendor that truly understands their unique challenges and operational needs is such a significant advantage.
At LigoLab, our sole focus is the success of independent laboratories. With over 20 years of experience and proven best practices, we have an in-depth understanding of the market dynamics and the medical laboratory solutions that empower labs to scale efficiently and thrive.
To learn more about how LigoLab's all-in-one LIS system solution can elevate your business, contact us today to connect with a product specialist.
Act Now: Connect with a LigoLab Product Specialist Today!
Frequently Asked Questions About Outgrowing Your LIS System
What is a laboratory information system (LIS), and what does it do?
A laboratory information system is software that records and stores patient and specimen data while tracking specimens through every stage of diagnostic testing. LIS systems also drive productivity and efficiency by automating workflows, generating lab reports, and distributing results to clients and healthcare providers across various settings.
How do I know if my lab has outgrown its current LIS system?
Common warning signs include difficulty adapting to regulatory or workflow changes, bottlenecks in laboratory workflow management, costly manual workarounds, inadequate integration with other systems, limited reporting capabilities, scalability restrictions, compliance gaps, lack of cloud or mobile support, and a high total cost of ownership. If your lab is experiencing several of these issues, it's likely time to evaluate more advanced LIS software.
What's the difference between an LIS and a LIMS?
A laboratory information system (LIS) supports clinical and pathology laboratories in healthcare settings, managing patient data, diagnostic workflows, and lab reporting. Developers build laboratory information management systems (LIMS) for research, quality control, and manufacturing environments. Although people sometimes use the terms interchangeably, they serve distinctly different purposes.
Why do labs struggle to recognize when they've outgrown their LIS system?
Because the decline in LIS performance is often gradual, labs tend to adapt to its limitations by adding manual workarounds, relying on spreadsheets, or accepting slow turnaround times as the norm. These workarounds can mask the underlying problem until the impact on productivity, revenue, or compliance becomes impossible to ignore.
What should I look for when evaluating a new laboratory information system?
Key features to confirm include a rule engine, automation engine, integration engine, specimen tracking, lab billing management, patient engagement tools, outreach capabilities, document scanning, send-out management, business intelligence reporting, and customer service management. Equally important is evaluating the LIS vendor's support model, including availability, training, and any hidden costs for adding users or modules as your lab grows.
How does a modern LIS system help with regulatory compliance?
Advanced laboratory information systems support compliance by automating and standardizing procedures, maintaining complete audit trails, managing quality control data, tracking validation and calibration schedules, enforcing privacy and data security protocols, and providing analytics tools that support continuous improvement. Leading LIS software can also interface with EHRs, laboratory billing solutions, and health information exchanges to meet interoperability requirements.
Is it expensive to switch to a new laboratory information system?
The cost of switching varies depending on the platform, the scope of implementation, and data migration requirements. However, the more important question is the total cost of staying on an outdated system, which often includes excessive vendor fees for configuration changes, manual workaround labor costs, compliance risks, and missed revenue opportunities. LigoLab designs modern LIS software platforms to deliver strong ROI while avoiding the inflated ownership costs common with legacy systems.
Does LigoLab support both cloud-based and on-premises LIS deployments?
Yes. LigoLab's all-in-one LIS platform supports both on-premises and cloud deployments, giving labs the flexibility to choose the model that best fits their infrastructure, data control preferences, and long-term growth strategy.
How is LigoLab different from other laboratory information system companies?
LigoLab's exclusive focus is the success of independent clinical laboratories, reference labs, and pathology groups. With over 20 years of experience, a fully integrated all-in-one platform, and a support model built to be a true extension of each lab's team, LigoLab offers a depth of commitment and specialization that many larger, generalist LIS vendors simply cannot match.





